Alphabet: ACGT ############################################### #p53 bdg site consensus: GGACATGCCC-GGGCATGTCT State BEGIN E: 0.25 0.25 0.25 0.25 T: BG 0.9995 B1 0.0004 END 0.0001 State BG E: 0.25 0.25 0.25 0.25 T: BG 0.9995 B1 0.0004 END 0.0001 State B1 E: 0.38 0.08 0.43 0.11 T: B2 1 State B2 E: 0.30 0.03 0.64 0.03 T: B3 1 State B3 E: 0.70 0.027 0.27 0.003 T: B4 1 State B4 E: 0.000001 0.97 0.000001 0.029998 T: B5 1 State B5 E: 0.77 0.03 0.000001 0.199999 T: B6 1 State B6 E: 0.07 0.019998 0.000001 0.91 T: B7 1 State B7 E: 0.000001 0.000001 0.999997 0.000001 T: B8 1 State B8 E: 0.017 0.66 0.003 0.32 T: B9 1 State B9 E: 0.000001 0.89 0.003 0.106999 T: B10 1 State B10 E: 0.089999 0.63 0.000001 0.28 T: B11 0.8 SP 0.2 State SP E: 0.25 0.25 0.25 0.25 T: B11 0.9 SP 0.1 State B11 E: 0.16 0.06 0.63 0.15 T: B12 1 State B12 E: 0.06 0.003 0.91 0.027 T: B13 1 State B13 E: 0.31 0.019999 0.67 0.000001 T: B14 1 State B14 E: 0.000001 0.97 0.000001 0.029998 T: B15 1 State B15 E: 0.74 0.06 0.06 0.14 T: B16 1 State B16 E: 0.11 0.003 0.027 0.86 T: B17 1 State B17 E: 0.000001 0.000001 0.999997 0.000001 T: B18 1 State B18 E: 0.017 0.26 0.003 0.72 T: B19 1 State B19 E: 0.027 0.65 0.003 0.32 T: B20 1 State B20 E: 0.06 0.41 0.09 0.44 T: BG 0.9998 B1 0.0001 END 0.0001 State END E: 0.25 0.25 0.25 0.25 T: END 0 ################################################ # NULLMODEL: 0.25 0.25 0.25 0.25 # #avoid states being in more than one tie group! fix_em: BEGIN END SP BG # #avoid blank lines, especially a trailing blank line #######