S3_using_G20

Super-paramagnetic Clustering of 4 points in a 24 dimensional space.

Each point is a row.

Table of Contents

K Mutual Nearest Neighbors

Dendrogram with Stable Clusters

A Dendrogram next to Reordered Data

Reordered Samples

Files for TreeView

Parameters for SPC

PCA of points

K Mutual Nearest Neighbors (K=2)

Dendrogram with Stable clusters

Reordered Data

A Dendrogram next to Reordered Data

Reordered Samples

1	1				1076.cel
2	4				1780.cel
3	2				148.cel
4	3				1553.cel

Genes Names

1	7	213684_s_at		LIM Chr:4q22
2	4	212249_at		PIK3R1 Chr:5q13.1
3	9	215342_s_at		HHL Chr:1q24
4	13	224828_at		CPEB4 Chr:5q21
5	6	212993_at		--- ---
6	14	224829_at		CPEB4 Chr:5q21
7	1	1559391_s_at		--- ---
8	2	204964_s_at		SSPN Chr:12p11.2
9	12	223185_s_at		BHLHB3 Chr:12p11.23-p12.1
10	8	213998_s_at		DDX17 Chr:22q13.1
11	11	223079_s_at		GLS Chr:2q32-q34
12	15	228471_at		LOC91526 Chr:2q33.1
13	5	212762_s_at		TCF7L2 Chr:10q25.3
14	10	222787_s_at		FLJ11273 Chr:7p21.3
15	16	231109_at		--- ---
16	21	243149_at		--- ---
17	17	235803_at		--- ---
18	3	209023_s_at		STAG2 Chr:xq25
19	24	244112_x_at		--- ---
20	18	236251_at		--- ---
21	22	243240_at		--- ---
22	23	244045_at		--- ---
23	19	241060_x_at		--- ---
24	20	242579_at		--- ---

Files for TreeView

Raw Data Gene Tree Array Tree Clustered Data

Parameters for SPC

K (nearest neighbors)	2
Min T	0.000000
Max T	0.250000
Delta T	0.004000
Cycles	3000
Growth	TRUE
Stable delta T	4
Ignore dropout size	1

Created by SPC_HTML_REPORT on 12-Aug-2004 15:48:01