S3_using_G2

Super-paramagnetic Clustering of 4 points in a 19 dimensional space.

Each point is a row.

Table of Contents

K Mutual Nearest Neighbors

Dendrogram with Stable Clusters

A Dendrogram next to Reordered Data

Reordered Samples

Files for TreeView

Parameters for SPC

PCA of points

K Mutual Nearest Neighbors (K=2)

Dendrogram with Stable clusters

Reordered Data

A Dendrogram next to Reordered Data

Reordered Samples

1	1				1076.cel
2	2				148.cel
3	3				1553.cel
4	4				1780.cel

Genes Names

1	2	201028_s_at		CD99 Chr:xp22.32; yp11.3
2	5	201798_s_at		FER1L3 Chr:10q24
3	6	203854_at		IF Chr:4q25
4	7	204646_at		DPYD Chr:1p22
5	1	200986_at		SERPING1 Chr:11q12-q13.1
6	12	210427_x_at		ANXA2 Chr:15q21-q22
7	4	201590_x_at		ANXA2 Chr:15q21-q22
8	14	213503_x_at		ANXA2 Chr:15q21-q22
9	11	208816_x_at		ANXA2P1 Chr:4q21-q31
10	3	201426_s_at		VIM Chr:10p13
11	10	208747_s_at		C1S Chr:12p13
12	13	212067_s_at		C1R Chr:12p13
13	17	221773_at		ELK3 Chr:12q23
14	8	207808_s_at		PROS1 Chr:3q11.2
15	15	214853_s_at		SHC1 Chr:1q21
16	16	218983_at		C1RL Chr:12p13.31
17	9	208659_at		CLIC1 Chr:6p22.1-p21.2
18	18	226621_at		FGG Chr:4q28
19	19	228141_at		--- ---

Files for TreeView

Raw Data Gene Tree Array Tree Clustered Data

Parameters for SPC

K (nearest neighbors)	2
Min T	0.000000
Max T	0.250000
Delta T	0.004000
Cycles	3000
Growth	TRUE
Stable delta T	4
Ignore dropout size	1

Created by SPC_HTML_REPORT on 12-Aug-2004 15:06:29