S2_using_G22

Super-paramagnetic Clustering of 4 points in a 34 dimensional space.

Each point is a row.

Table of Contents

K Mutual Nearest Neighbors

Dendrogram with Stable Clusters

A Dendrogram next to Reordered Data

Reordered Samples

Files for TreeView

Parameters for SPC

PCA of points

K Mutual Nearest Neighbors (K=1)

Dendrogram with Stable clusters

Reordered Data

A Dendrogram next to Reordered Data

Reordered Samples

1	1				1357.cel
2	2				1795R.cel
3	3				1869RR.cel
4	4				55.cel

Genes Names

1	9	205498_at		GHR Chr:5p13-p12
2	10	206953_s_at		LPHN2 Chr:1p31.1
3	2	201925_s_at		DAF Chr:1q32
4	21	226210_s_at		MEG3 Chr:14q32
5	22	226211_at		MEG3 Chr:14q32
6	3	202409_at		--- ---
7	4	202410_x_at		IGF2 Chr:11p15.5
8	6	203477_at		COL15A1 Chr:9q21-q22
9	11	207002_s_at		PLAGL1 Chr:6q24-q25
10	12	207943_x_at		PLAGL1 Chr:6q24-q25
11	13	209318_x_at		PLAGL1 Chr:6q24-q25
12	20	215513_at		HYMAI Chr:6q24
13	28	232355_at		--- ---
14	7	203924_at		GSTA1 Chr:6p12.1
15	8	204548_at		STAR Chr:8p11.2
16	5	202965_s_at		CAPN6 Chr:xq23
17	17	212713_at		MFAP4 Chr:17p11.2
18	14	209560_s_at		DLK1 Chr:14q32
19	15	210002_at		GATA6 Chr:18q11.1-q11.2
20	1	1559282_at		--- ---
21	24	227297_at		ITGA9 Chr:3p21.3
22	26	227911_at		FLJ10312 Chr:18p11.23
23	27	227947_at		C6orf56 Chr:6q24.1
24	31	236220_at		--- ---
25	33	239006_at		SLC26A7 Chr:8q23
26	19	213943_at		TWIST1 Chr:7p21.2
27	32	237945_at		--- ---
28	34	242856_at		--- ---
29	23	226905_at		MGC45871 Chr:17p13
30	25	227646_at		EBF Chr:5q34
31	29	233261_at		EBF Chr:5q34
32	16	210794_s_at		MEG3 Chr:14q32
33	18	212956_at		KIAA0882 Chr:4q31.1
34	30	234994_at		KIAA1913 Chr:6q23.1

Files for TreeView

Raw Data Gene Tree Array Tree Clustered Data

Parameters for SPC

K (nearest neighbors)	1
Min T	0.000000
Max T	0.250000
Delta T	0.004000
Cycles	3000
Growth	TRUE
Stable delta T	4
Ignore dropout size	1

Created by SPC_HTML_REPORT on 12-Aug-2004 13:46:23